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🐛 Fix JSON output for semantic segmenation#1082

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shaneahmed merged 2 commits into
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bug-fix-semantic-segmentation-json
Jun 12, 2026
Merged

🐛 Fix JSON output for semantic segmenation#1082
shaneahmed merged 2 commits into
developfrom
bug-fix-semantic-segmentation-json

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@shaneahmed shaneahmed commented Jun 12, 2026

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  • Fix JSON output for semantic segmentation

@shaneahmed shaneahmed requested review from eshasadia and gozdeg June 12, 2026 11:30
@shaneahmed shaneahmed self-assigned this Jun 12, 2026
@shaneahmed shaneahmed added the bug Something isn't working label Jun 12, 2026
@shaneahmed shaneahmed added this to the Release v2.1.2 milestone Jun 12, 2026
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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 99.88%. Comparing base (822bd1e) to head (24e12e6).

Additional details and impacted files
@@             Coverage Diff             @@
##           develop    #1082      +/-   ##
===========================================
- Coverage    99.88%   99.88%   -0.01%     
===========================================
  Files           85       85              
  Lines        11661    11659       -2     
  Branches      1530     1530              
===========================================
- Hits         11648    11646       -2     
  Misses           7        7              
  Partials         6        6              

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@shaneahmed shaneahmed merged commit bcc48fa into develop Jun 12, 2026
54 of 55 checks passed
@shaneahmed shaneahmed deleted the bug-fix-semantic-segmentation-json branch June 12, 2026 12:24
@shaneahmed shaneahmed mentioned this pull request Jun 12, 2026
shaneahmed added a commit that referenced this pull request Jun 12, 2026
## TIAToolbox v2.1.2 (2026-06-12)

### 🐞 Bug Fixes and Other Changes

- Fix errors due to changes in matplotlib colormaps API (#1081)
- Fix semantic segmentor JSON output (#1082)

### 🛠️ Development-Related Changes

- Add `albucore` dependency for conda build (#1081)
- Update minimum requirement for `matplotlib` to `3.10.0`

---------

Signed-off-by: Shan E Ahmed Raza <13048456+shaneahmed@users.noreply.github.com>
@shaneahmed shaneahmed mentioned this pull request Jun 12, 2026
shaneahmed added a commit that referenced this pull request Jun 12, 2026
## TIAToolbox v2.1.2 (2026-06-12)

### 🐞 Bug Fixes and Other Changes

- Fix errors due to changes in matplotlib colormaps API (#1081)
- Fix semantic segmentor JSON output (#1082)

### 🛠️ Development-Related Changes

- Add `albucore` dependency for conda build (#1081)
- Update minimum requirement for `matplotlib` to `3.10.0`
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SemanticSegmentor output_type="qupath" writes polygons that QuPath can't load

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