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Question about dnase_bias_estimator.py

Status: Open.

#47 In jpiper/pyDNase;

· leinmeng opened on Jan 20, 2020

matplotlib version

Status: Open.

#46 In jpiper/pyDNase;

· glucksfall opened on Sep 26, 2019

Why the wellington score is negative when I ran wellington_footprint with ATAC-seq data?

Status: Open.

#45 In jpiper/pyDNase;

· tzhu-bio opened on Aug 26, 2019

bol

Status: Open.

#44 In jpiper/pyDNase;

· Salvacasani opened on May 17, 2019

Empty bed file after running wellington_footprints.py

Status: Open.

#43 In jpiper/pyDNase;

· hiroyukikato911 opened on Jan 18, 2019

Question about shifting alignment

Status: Open.

#42 In jpiper/pyDNase;

· Wanvdphelys opened on Oct 25, 2018

Support for unstranded bed lines

Status: Open.

#41 In jpiper/pyDNase;

· akmorrow13 opened on Oct 12, 2018

wellington_footprints syntax error

Status: Open.

#40 In jpiper/pyDNase;

· rsisaac opened on Aug 17, 2018

Migrate docs

Status: Open.

#38 In jpiper/pyDNase;

· jpiper opened on Apr 1, 2018

wellington_bootstrap.py finishes with empty files

Status: Open.

#37 In jpiper/pyDNase;

· KRSBar opened on Mar 30, 2018

wellington footprints never finishes

Status: Open.

#29 In jpiper/pyDNase;

· billgreenwald opened on Feb 2, 2018

Allow footprinting from bias-corrected data.

Status: Open.

#27 In jpiper/pyDNase;

· jpiper opened on Jan 27, 2018