Biomedical Informatics at ETH Zurich
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- MinknoApiSimulator Public
ratschlab/MinknoApiSimulator’s past year of commit activity - seq2squiggle Public Forked from ZKI-PH-ImageAnalysis/seq2squiggle
End-to-end simulation of nanopore sequencing signals with feed-forward transformers
ratschlab/seq2squiggle’s past year of commit activity - aestetik Public
AESTETIK: Convolutional autoencoder for learning spot representations from spatial transcriptomics and morphology data
ratschlab/aestetik’s past year of commit activity - DeepSpot Public
DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and single-cell (Xenium) resolution.
ratschlab/DeepSpot’s past year of commit activity - he2st Public
Code of the paper "DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images"
ratschlab/he2st’s past year of commit activity - stmdit Public
ratschlab/stmdit’s past year of commit activity - spladder Public
Tool for the detection and quantification of alternative splicing events from RNA-Seq data.
ratschlab/spladder’s past year of commit activity
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