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add msg.cfg parameter for one.sit.per.read in fit-hmm.R

Status: Open.

#41 In JaneliaSciComp/msg;

· gregpinero opened on Dec 9, 2013

Have MSG Log all version numbers of dependencies

Status: Open.

#39 In JaneliaSciComp/msg;

· gregpinero opened on Nov 9, 2012

summaryPlots.R - Single Individual Fix

Status: Open.

#38 In JaneliaSciComp/msg;

· gregpinero opened on Nov 2, 2012

Parsing config files - skip over blank values

Status: Open.

#37 In JaneliaSciComp/msg;

· gregpinero opened on Oct 22, 2012

/ Character in FASTA sequence identifiers causes MSG to think references are directories

Status: Open.

#36 In JaneliaSciComp/msg;

· gregpinero opened on Oct 4, 2012

summaryPlots.R - Generate Off-diagonal LOD on Thinned Data instead of full data

Status: Open.

#34 In JaneliaSciComp/msg;

· gregpinero opened on Jul 19, 2012

MSG incorrectly skips generating stampy index files for indiv's on some reruns

Status: Open.

#33 In JaneliaSciComp/msg;

· gregpinero opened on Jun 26, 2012

Handle slashes (and other chars) in barcodes

Status: Open.

#32 In JaneliaSciComp/msg;

· gregpinero opened on Jun 20, 2012

summaryPlots.R - On memory error in thinning - should show helpful message

Status: Open.

#30 In JaneliaSciComp/msg;

· gregpinero opened on Apr 17, 2012

Fix Stampy Issue: stampy: Error: invalid data stream - and remove ln -s workaround

Status: Open.

#28 In JaneliaSciComp/msg;

· gregpinero opened on Feb 17, 2012

Create more documentation - see notes

Status: Open.

#27 In JaneliaSciComp/msg;

· gregpinero opened on Feb 14, 2012

Include More Dependencies in Source/GitHub

Status: Open.

#23 In JaneliaSciComp/msg;

· gregpinero opened on Jan 31, 2012